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  5. Sacu_v1.1_s0038.g012035

Sacu_v1.1_s0038.g012035


Description : not classified & original description: CDS=926-3049


Gene families : OG0001424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0038.g012035

Target Alias Description ECC score Gene Family Method Actions
Adi_g109483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012562 No alias not classified & original description: CDS=122-2542 0.04 OrthoFinder output from all 47 species
Ceric.13G055800.1 Ceric.13G055800 not classified & original description: pacid=50636327... 0.04 OrthoFinder output from all 47 species
Ceric.15G039900.1 Ceric.15G039900 not classified & original description: pacid=50640096... 0.03 OrthoFinder output from all 47 species
Mp1g04810.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g12567 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g104540.3.1 Solyc01g104540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g013760.2.1 Solyc11g013760 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 84 131
No external refs found!