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  5. Sacu_v1.1_s0038.g012026

Sacu_v1.1_s0038.g012026


Description : not classified & original description: CDS=1-2097


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0038.g012026
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Dde_g18369 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g07871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003856 3-dehydroquinate synthase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR007658 DUF594 639 681
IPR025315 DUF4220 60 439
No external refs found!