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  5. Sacu_v1.1_s0038.g011903

Sacu_v1.1_s0038.g011903


Description : not classified & original description: CDS=1-993


Gene families : OG0000502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000502_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0038.g011903

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00064700 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G28690 No alias Protein of unknown function (DUF1685) 0.03 OrthoFinder output from all 47 species
Adi_g079642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0167.g054472 No alias not classified & original description: CDS=1-825 0.03 OrthoFinder output from all 47 species
Ceric.04G048200.1 Ceric.04G048200 not classified & original description: pacid=50631848... 0.03 OrthoFinder output from all 47 species
Dde_g01601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036220001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_34732 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g04264 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000743 No alias not classified & original description: CDS=206-1516 0.03 OrthoFinder output from all 47 species
Smo437629 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g38879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR012881 DUF1685 226 274
No external refs found!