Sacu_v1.1_s0037.g011838


Description : not classified & original description: CDS=150-581


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0037.g011838

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00033430 evm_27.TU.AmTr_v1... Cell number regulator 10 OS=Zea mays 0.02 OrthoFinder output from all 47 species
AT1G14870 PCR2 PLANT CADMIUM RESISTANCE 2 0.03 OrthoFinder output from all 47 species
AT1G14880 PCR1 PLANT CADMIUM RESISTANCE 1 0.03 OrthoFinder output from all 47 species
AT1G52200 No alias PLAC8 family protein 0.04 OrthoFinder output from all 47 species
AT3G18460 No alias PLAC8 family protein 0.03 OrthoFinder output from all 47 species
Aob_g21203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g48118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13588.t1 Aspi01Gene13588 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G016600.1 Ceric.11G016600 not classified & original description: pacid=50596443... 0.03 OrthoFinder output from all 47 species
Ceric.19G000200.1 PCR2, Ceric.19G000200 not classified & original description: pacid=50576478... 0.03 OrthoFinder output from all 47 species
Ceric.31G000100.1 Ceric.31G000100 not classified & original description: pacid=50575022... 0.04 OrthoFinder output from all 47 species
Dac_g24147 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g16541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008259001 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01011926001 PCR2 Cell number regulator 2 OS=Zea mays 0.03 OrthoFinder output from all 47 species
LOC_Os02g36940.1 LOC_Os02g36940 Cell number regulator 2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os02g36950.1 LOC_Os02g36950 Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g61470.1 LOC_Os03g61470 Cell number regulator 10 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os10g02300.3 LOC_Os10g02300 Cell number regulator 10 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Lfl_g29762 PCR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_7245g0010 PCR11 Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pnu_g16610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005470.3.1 PCR2, Solyc01g005470 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g009620.4.1 Solyc05g009620 Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e011704_P001 PCR2, Zm00001e011704 Cell number regulator 10 OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!