Sacu_v1.1_s0036.g011665

Description : aminoacyl-tRNA binding factor *(eEF1A)) & original description: CDS=1-1572

Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0036.g011665

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os03g08020.1	LOC_Os03g08020	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species
LOC_Os03g08050.1	LOC_Os03g08050	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species
Len_g26553	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Mp3g23400.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.02	OrthoFinder output from all 47 species
Ppi_g05066	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Sam_g37732	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Sam_g46860	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc11g069097.1.1	Solyc11g069097	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species
Spa_g50273	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006820	monoatomic anion transport	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004161	EFTu-like_2	324	389
IPR000795	T_Tr_GTP-bd_dom	81	297
IPR004160	Transl_elong_EFTu/EF1A_C	398	505

External Links

No external refs found!