MA_10429624g0010


Description : RING-H2-class E3 ligase


Gene families : OG_01_0009928 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009928_tree ,
OG_02_0001529 (LandPlants) Phylogenetic Tree(s): OG_02_0001529_tree ,
OG_03_0000773 (SeedPlants) Phylogenetic Tree(s): OG_03_0000773_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429624g0010
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
MA_107765g0010 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
MA_5076208g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
AT1G72200 No alias RING/U-box superfamily protein 0.03 LandPlants
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.02 LandPlants
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_107765g0010 No alias RING-H2-class E3 ligase 0.06 LandPlants
MA_5076208g0010 No alias no hits & (original description: none) 0.09 LandPlants
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Solyc03g112340.1.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e023832_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.04 LandPlants
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
AT1G72200 No alias RING/U-box superfamily protein 0.02 SeedPlants
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
MA_107765g0010 No alias RING-H2-class E3 ligase 0.04 SeedPlants
MA_5076208g0010 No alias no hits & (original description: none) 0.07 SeedPlants
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 155 198
No external refs found!