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  5. Sacu_v1.1_s0036.g011548

Sacu_v1.1_s0036.g011548


Description : not classified & original description: CDS=1-762


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0036.g011548
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Adi_g008655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021758 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g051117 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Adi_g052567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113666 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Adi_g125956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12265 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ala_g01712 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Als_g25669 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g29178 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Als_g38636 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Aop_g14080 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Cba_g07634 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Cba_g13130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16100 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Cba_g32236 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Dac_g22233 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Dde_g00740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31661 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
MA_17423g0010 No alias component MED26 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Msp_g39069 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Nbi_g13088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04446 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ppi_g03797 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ppi_g17469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29561 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Zm00001e010865_P001 Zm00001e010865 component MED26 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Zm00001e027059_P003 Zm00001e027059 component MED26 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Zm00001e035696_P001 Zm00001e035696 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 186 235
No external refs found!