Sacu_v1.1_s0036.g011541


Description : not classified & original description: CDS=1-1935


Gene families : OG0001585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001585_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0036.g011541
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00052440 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G47440 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G02100 No alias Heat shock protein DnaJ with tetratricopeptide repeat 0.05 OrthoFinder output from all 47 species
Ala_g03836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15783 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g10727 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene25199.t1 Aspi01Gene25199 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33036.t1 Aspi01Gene33036 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72530.t1 Aspi01Gene72530 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048903 No alias not classified & original description: CDS=127-2157 0.05 OrthoFinder output from all 47 species
Cba_g03335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G060400.1 Ceric.05G060400 not classified & original description: pacid=50579138... 0.03 OrthoFinder output from all 47 species
Ceric.07G091800.1 Ceric.07G091800 not classified & original description: pacid=50627264... 0.05 OrthoFinder output from all 47 species
Ceric.12G062700.1 Ceric.12G062700 not classified & original description: pacid=50600807... 0.03 OrthoFinder output from all 47 species
Ceric.32G043600.1 Ceric.32G043600 not classified & original description: pacid=50597338... 0.03 OrthoFinder output from all 47 species
Dac_g01628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14510 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15467 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_38343 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g49000.1 LOC_Os07g49000 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Lfl_g01932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431486g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_39821g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g03965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01137 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g36571 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g11323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g079580.3.1 Solyc01g079580 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g07917 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g21732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29250 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001414_P003 Zm00001e001414 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e011009_P001 Zm00001e011009 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA

No InterPro domains available for this sequence

No external refs found!