Sacu_v1.1_s0036.g011519


Description : not classified & original description: CDS=1-3069


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0036.g011519

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00127550 evm_27.TU.AmTr_v1... Protein QUIRKY OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00009p00255480 evm_27.TU.AmTr_v1... FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00218970 evm_27.TU.AmTr_v1... FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G04150 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.04 OrthoFinder output from all 47 species
AT3G61300 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.04 OrthoFinder output from all 47 species
AT4G00700 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
AT5G17980 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.04 OrthoFinder output from all 47 species
Aev_g01564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07946 QKY not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g10581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G076300.1 Ceric.19G076300 not classified & original description: pacid=50576019... 0.03 OrthoFinder output from all 47 species
Ceric.22G069500.1 Ceric.22G069500 not classified & original description: pacid=50615182... 0.03 OrthoFinder output from all 47 species
Dcu_g25894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_33902 No alias no description available(sp|q60ew9|ftip7_orysj : 1244.0) 0.05 OrthoFinder output from all 47 species
LOC_Os01g40480.1 QKY, LOC_Os01g40480 Protein QUIRKY OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g44490.1 LOC_Os02g44490 no description available(sp|q9m2r0|ftip3_arath : 717.0) 0.04 OrthoFinder output from all 47 species
LOC_Os04g39680.1 LOC_Os04g39680 FT-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g35480.1 LOC_Os05g35480 no description available(sp|q9m2r0|ftip3_arath : 998.0) 0.04 OrthoFinder output from all 47 species
LOC_Os06g41090.1 LOC_Os06g41090 no description available(sp|q69t22|ftip1_orysj : 1449.0) 0.02 OrthoFinder output from all 47 species
LOC_Os07g07070.1 LOC_Os07g07070 Protein QUIRKY OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g02418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436836g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 197.0) 0.05 OrthoFinder output from all 47 species
MA_5279581g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 296.0) 0.04 OrthoFinder output from all 47 species
MA_7640327g0010 QKY Protein QUIRKY OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_94243g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 850.0) 0.02 OrthoFinder output from all 47 species
Mp6g00440.1 No alias no description available(sp|q60ew9|ftip7_orysj : 926.0) 0.03 OrthoFinder output from all 47 species
Msp_g13144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018526 No alias not classified & original description: CDS=1-3183 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0123.g021517 No alias not classified & original description: CDS=10-3006 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0211.g025914 No alias not classified & original description: CDS=1-2928 0.05 OrthoFinder output from all 47 species
Solyc01g006620.3.1 Solyc01g006620 no description available(sp|q9m2r0|ftip3_arath : 1132.0) 0.04 OrthoFinder output from all 47 species
Solyc01g086720.3.1 Solyc01g086720 FT-interacting protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc01g094410.3.1 Solyc01g094410 no description available(sp|q9m2r0|ftip3_arath : 1084.0) 0.04 OrthoFinder output from all 47 species
Solyc03g113190.1.1 QKY, Solyc03g113190 Protein QUIRKY OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g080420.3.1 Solyc10g080420 no description available(sp|q9m2r0|ftip3_arath : 846.0) 0.02 OrthoFinder output from all 47 species
Spa_g20897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e016221_P001 Zm00001e016221 no description available(sp|q9m2r0|ftip3_arath : 957.0) 0.05 OrthoFinder output from all 47 species
Zm00001e024540_P001 Zm00001e024540 no description available(sp|q60ew9|ftip7_orysj : 170.0) 0.02 OrthoFinder output from all 47 species
Zm00001e034984_P001 Zm00001e034984 no description available(sp|q9m2r0|ftip3_arath : 1021.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000930 gamma-tubulin complex IEP HCCA
CC GO:0000931 gamma-tubulin ring complex IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0031503 protein-containing complex localization IEP HCCA
BP GO:0033566 gamma-tubulin complex localization IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 7 109
IPR000008 C2_dom 284 384
IPR000008 C2_dom 412 523
IPR000008 C2_dom 602 722
IPR013583 PRibTrfase_C 867 1022
No external refs found!