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Aliases : RPS5B, ATRPS5B
Description : component *(uS7) of small ribosomal-subunit (SSU) proteome & original description: CDS=116-730
Gene families : OG0002478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002478_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00068p00119380 | RPS5B, ATRPS5B,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00090p00050460 | RPS5B, ATRPS5B,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G11940 | AML1, RPS5A, ATRPS5A | ribosomal protein 5A | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g078109 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g078110 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g01983 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g290950 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10905 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10561 | AML1, RPS5A, ATRPS5A | component RPS5 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g01060.1 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Len_g06369 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10428487g0010 | RPS5B, ATRPS5B | component RPS5 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g10570.1 | RPS5B, ATRPS5B | component RPS5 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c23_6150V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c8_16820V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c8_16860V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g15969 | No alias | component *(uS7) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo164593 | AML1, RPS5A, ATRPS5A | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g078620.1.1 | AML1, RPS5A,... | component RPS5 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g042610.2.1 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17272 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g01481 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025608_P002 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031425_P002 | AML1, RPS5A,... | component RPS5 of SSU proteome | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003725 | double-stranded RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023798 | Ribosomal_S7_dom | 62 | 204 |
| No external refs found! |