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  5. Sacu_v1.1_s0035.g011370

Sacu_v1.1_s0035.g011370


Description : not classified & original description: CDS=1-1383


Gene families : OG0001667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001667_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0035.g011370

Target Alias Description ECC score Gene Family Method Actions
Adi_g025163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68509.t1 Aspi01Gene68509 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre02.g118250 No alias No description available 0.02 OrthoFinder output from all 47 species
Pnu_g15612 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 384 457
IPR003121 SWIB_MDM2_domain 237 308
IPR014876 DEK_C 78 131
No external refs found!