Solyc09g082320.3.1 (Solyc09g082320.3)

Aliases : Solyc09g082320.3

Description : protein.degradation.ubiquitin.proteasom Encodes 20S proteasome beta subunit PBD1 (PBD1). 20S proteasome beta subunit D1 (PBD1)

Gene families : OG_01_0004714 (Gene family) Phylogenetic Tree(s): OG0004714_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc09g082320.3.1
Cluster HCCA cluster: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT4G14800 PBD2 20S proteasome beta subunit D2 0.15 Gene family
Cpa|evm.model.tig00020554.80 No alias protein.degradation.ubiquitin.proteasom... 0.07 Gene family
Cre14.g610950 No alias protein.degradation.ubiquitin.proteasom... 0.17 Gene family
LOC_Os03g48930 Os03g0695600 protein.degradation.ubiquitin.proteasom... 0.06 Gene family
MA_119122g0010 No alias protein.degradation.ubiquitin.proteasom... 0.05 Gene family
Smo165201 PACid_15411866 No description available 0.03 Gene family
Zm00001d013505 GRMZM2G111566 protein.degradation.ubiquitin.proteasom... 0.06 Gene family
Zm00001d033596 GRMZM2G097164 protein.degradation.ubiquitin.proteasom... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan
CC GO:0005839 proteasome core complex IEA InterProScan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 3 182
No external refs found!