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  5. Sacu_v1.1_s0034.g011257

Sacu_v1.1_s0034.g011257 (RHS8)


Aliases : RHS8

Description : not classified & original description: CDS=1-1668


Gene families : OG0000180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0034.g011257

Target Alias Description ECC score Gene Family Method Actions
Als_g37133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048682 No alias not classified & original description: CDS=644-2323 0.04 OrthoFinder output from all 47 species
Cba_g25028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z125100.1 Ceric.1Z125100 not classified & original description: pacid=50582244... 0.03 OrthoFinder output from all 47 species
Dac_g07922 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12520 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26388 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Gb_07528 No alias Probable xyloglucan galactosyltransferase GT19... 0.04 OrthoFinder output from all 47 species
LOC_Os10g32110.1 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 OrthoFinder output from all 47 species
LOC_Os10g32170.1 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 OrthoFinder output from all 47 species
MA_10428118g0010 No alias Probable xyloglucan galactosyltransferase GT19... 0.03 OrthoFinder output from all 47 species
MA_2898973g0010 No alias Probable xyloglucan galactosyltransferase GT19... 0.02 OrthoFinder output from all 47 species
MA_76602g0010 No alias Probable xyloglucan galactosyltransferase GT11... 0.03 OrthoFinder output from all 47 species
Mp1g17340.1 No alias Probable xyloglucan galactosyltransferase GT15... 0.02 OrthoFinder output from all 47 species
Pnu_g28905 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16473 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018133 No alias not classified & original description: CDS=1-1707 0.03 OrthoFinder output from all 47 species
Sam_g08551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g080930.1.1 RHS8, Solyc08g080930 xyloglucan galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Solyc12g056260.1.1 RHS8, Solyc12g056260 xyloglucan galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Spa_g04915 GT18, ATGT18 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14538 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002306_P001 Zm00001e002306 Probable xyloglucan galactosyltransferase GT19... 0.04 OrthoFinder output from all 47 species
Zm00001e037897_P001 Zm00001e037897 Probable xyloglucan galactosyltransferase GT19... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 108 487
No external refs found!