Sacu_v1.1_s0034.g011233 (SCN1)

Aliases : SCN1

Description : guanine nucleotide dissociation inhibitor *(RopGDI) & original description: CDS=2-982

Gene families : OG0001513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001513_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0034.g011233

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00174290	SCN1,...	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
AT3G07880	SCN1	Immunoglobulin E-set superfamily protein	0.01	OrthoFinder output from all 47 species
Aev_g16933	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Ala_g16981	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.02	OrthoFinder output from all 47 species
Als_g05419	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene00793.t1	SCN1, Aspi01Gene00793	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene04303.t1	SCN1, Aspi01Gene04303	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene41261.t1	SCN1, Aspi01Gene41261	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.04	OrthoFinder output from all 47 species
Cba_g15388	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Ceric.31G032800.1	SCN1, Ceric.31G032800	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Dde_g51936	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
LOC_Os01g68540.1	SCN1, LOC_Os01g68540	guanine nucleotide dissociation inhibitor (RopGDI)	0.02	OrthoFinder output from all 47 species
Lfl_g37795	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Mp2g06810.1	SCN1	guanine nucleotide dissociation inhibitor (RopGDI)	0.02	OrthoFinder output from all 47 species
Msp_g03891	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.02	OrthoFinder output from all 47 species
Msp_g21563	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.06	OrthoFinder output from all 47 species
Ppi_g00513	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.02	OrthoFinder output from all 47 species
Ppi_g05008	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.02	OrthoFinder output from all 47 species
Sam_g08474	No alias	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.08	OrthoFinder output from all 47 species
Sam_g25794	No alias	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.05	OrthoFinder output from all 47 species
Sam_g49225	No alias	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.02	OrthoFinder output from all 47 species
Sam_g50701	No alias	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.04	OrthoFinder output from all 47 species
Zm00001e015664_P002	SCN1, Zm00001e015664	guanine nucleotide dissociation inhibitor (RopGDI)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005092	GDP-dissociation inhibitor activity	None	Extended
MF	GO:0005094	Rho GDP-dissociation inhibitor activityCreate custom network	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	None	Extended
BP	GO:0007265	Ras protein signal transduction	None	Extended
BP	GO:0007266	Rho protein signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0032392	DNA geometric change	IEP	HCCA
BP	GO:0032508	DNA duplex unwinding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000406	Rho_GDI	140	324

External Links

No external refs found!

Sacu_v1.1_s0034.g011233 (SCN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation