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  5. Sacu_v1.1_s0034.g011208

Sacu_v1.1_s0034.g011208 (PA200)


Aliases : PA200

Description : proteasome core particle assembly factor *(PA200) & original description: CDS=85-3219


Gene families : OG0001792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001792_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0034.g011208
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Adi_g001200 PA200 proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species
Adi_g009518 PA200 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04614 PA200 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene50961.t1 PA200, Aspi01Gene50961 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene62922.t1 PA200, Aspi01Gene62922 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G047600.1 PA200, Ceric.17G047600 proteasome core particle assembly factor *(PA200) &... 0.07 OrthoFinder output from all 47 species
Cre14.g628702 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dde_g10206 PA200 proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species
Gb_01100 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g11444 PA200 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Lfl_g35781 PA200 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016437 PA200 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Spa_g07611 PA200 proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004484 mRNA guanylyltransferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR032430 Blm10_mid 648 803
IPR032430 Blm10_mid 533 643
IPR032430 Blm10_mid 307 515
No external refs found!