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  5. Sacu_v1.1_s0034.g011187

Sacu_v1.1_s0034.g011187


Description : nuclear lamina CRWN-interacting protein *(KAKU4) & original description: CDS=154-2739


Gene families : OG0002028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0034.g011187
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Als_g31899 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07485.t1 Aspi01Gene07485 nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Len_g23957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g32864 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Lfl_g09768 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.04 OrthoFinder output from all 47 species
Lfl_g14234 No alias nuclear lamina CRWN-interacting protein *(KAKU4) &... 0.03 OrthoFinder output from all 47 species
Msp_g35297 No alias nuclear lamina CRWN-interacting protein *(KAKU4) &... 0.04 OrthoFinder output from all 47 species
Pir_g49128 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Ppi_g01408 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0140352 export from cell IEP HCCA

No InterPro domains available for this sequence

No external refs found!