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  5. Sacu_v1.1_s0033.g011038

Sacu_v1.1_s0033.g011038


Description : not classified & original description: CDS=449-1135


Gene families : OG0000434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000434_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0033.g011038

Target Alias Description ECC score Gene Family Method Actions
AT5G03840 TFL-1, TFL1 PEBP (phosphatidylethanolamine-binding protein) family protein 0.02 OrthoFinder output from all 47 species
Aev_g03813 E12A11, MFT not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13335.t1 E12A11, MFT,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033829001 TFL-1, TFL1 Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_13114 E12A11, MFT PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Mp1g05700.1 No alias PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Ore_g27359 E12A11, MFT not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04223 E12A11, MFT not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10997 E12A11, MFT not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g055660.3.1 FT, Solyc05g055660 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Solyc09g009560.2.1 TFL-1, TFL1,... PEB protein-dependent signalling regulatory protein (PEBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008914 PEBP 104 206
No external refs found!