1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0032.g010839

Sacu_v1.1_s0032.g010839 (ATRAB1B, RABD2A,...)


Aliases : ATRAB1B, RABD2A, ATRABD2A, ARA5, RA-5, ARA-5

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: CDS=450-1010


Gene families : OG0001129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001129_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0032.g010839

Target Alias Description ECC score Gene Family Method Actions
AT1G02130 ATRAB1B, RABD2A,... RAS 5 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000455.18 RAB1C, ATRAB1C, ATRABD2C Ras-related protein RABD2c OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre12.g560150 ATRAB1A, ATRABD2B, RAB1A Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Dcu_g23024 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g43690.3 ATRAB1B, RABD2A,... GTP-binding protein YPTM2 OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Msp_g10383 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g078070.4.1 RAB1C, ATRAB1C,... D-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Spa_g18229 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34408 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR002933 Peptidase_M20 89 186
IPR001806 Small_GTPase 10 154
No external refs found!