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  5. Sacu_v1.1_s0032.g010765

Sacu_v1.1_s0032.g010765 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: CDS=1-1812


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0032.g010765

Target Alias Description ECC score Gene Family Method Actions
AT4G24390 No alias RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g014124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015381 COI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018200 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Adi_g023634 AFB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107960 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Adi_g112627 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Aev_g05454 COI1 component *(COI) of jasmonic acid receptor complex &... 0.01 OrthoFinder output from all 47 species
Ala_g07494 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Als_g18642 TIR1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g28117 AFB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11099 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Aob_g24321 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048837 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Cba_g01293 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Ceric.01G096900.1 AFB2, Ceric.01G096900 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ceric.11G069600.1 COI1, Ceric.11G069600 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Ceric.23G035700.1 COI1, Ceric.23G035700 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Dac_g00946 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g03063 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Dde_g01640 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ehy_g02828 COI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003183001 TIR1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_04106 COI1 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
LOC_Os05g37690.1 COI1, LOC_Os05g37690 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
LOC_Os11g31620.1 AFB2, LOC_Os11g31620 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Len_g13483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03214 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g15646 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Msp_g15130 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Sam_g04852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27933 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Sam_g28215 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Sam_g49637 No alias component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Solyc05g009260.1.1 TIR1, Solyc05g009260 Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Spa_g08292 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Spa_g18052 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Spa_g50974 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Tin_g00968 AFB2 substrate adaptor of SCF E3 ubiquiTin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Zm00001e008324_P001 AFB2, Zm00001e008324 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Zm00001e026935_P001 COI1, Zm00001e026935 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Zm00001e027505_P001 TIR1, Zm00001e027505 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e028730_P001 COI1, Zm00001e028730 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 100 146
IPR041567 COI1_F-box 41 80
IPR001611 Leu-rich_rpt 188 205
No external refs found!