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  5. Sacu_v1.1_s0031.g010677

Sacu_v1.1_s0031.g010677 (ATXR6, SDG34)


Aliases : ATXR6, SDG34

Description : class-IV histone methyltransferase *(ATXR5/6) & original description: CDS=1-1122


Gene families : OG0002675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0031.g010677

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00052390 ATXR6, SDG34,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Aop_g09442 ATXR6, SDG34 class-IV histone methyltransferase *(ATXR5/6) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene49650.t1 ATXR6, SDG34,... class-IV histone methyltransferase *(ATXR5/6) & original... 0.03 OrthoFinder output from all 47 species
Ceric.38G052900.1 SDG15, ATXR5,... class-IV histone methyltransferase *(ATXR5/6) & original... 0.02 OrthoFinder output from all 47 species
MA_73622g0010 ATXR6, SDG34 class IV histone methyltransferase component of histone... 0.05 OrthoFinder output from all 47 species
Mp5g03760.1 SDG15, ATXR5 class IV histone methyltransferase component of histone... 0.04 OrthoFinder output from all 47 species
Nbi_g10637 ATXR6, SDG34 class-IV histone methyltransferase *(ATXR5/6) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 33 79
No external refs found!