Sacu_v1.1_s0031.g010582 (ATRABE1C, ATRAB8A,...)

Aliases : ATRABE1C, ATRAB8A, ARA-3, RAB8A, ARA3

Description : not classified & original description: CDS=1-537

Gene families : OG0000945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000945_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0031.g010582
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
Adi_g100850	ATRABE1C,...	E-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g117529	ATRABE1C,...	E-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g30318	ATRABE1D,...	E-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g03072	ATRABE1D,...	E-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g03105	ATRABE1D,...	E-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene50349.t1	ATRABE1D,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07305	ATRABE1D,...	E-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14771	ATRABE1C,...	E-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Cre15.g641800	ATRABE1D,...	GTP-binding protein yptV2 OS=Volvox carteri	0.02	OrthoFinder output from all 47 species
Ehy_g25309	No alias	E-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01016596001	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.04	OrthoFinder output from all 47 species
GSVIVT01033680001	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
LOC_Os03g60530.1	ATRABE1C,...	E-class RAB GTPase	0.04	OrthoFinder output from all 47 species
LOC_Os05g38630.2	ATRABE1C,...	E-class RAB GTPase	0.03	OrthoFinder output from all 47 species
LOC_Os07g09680.1	ATRABE1E,...	E-class RAB GTPase	0.03	OrthoFinder output from all 47 species
LOC_Os07g13530.1	LOC_Os07g13530	E-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Len_g16013	ATRABE1D,...	E-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25496	ATRABE1D,...	E-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc10g086350.2.1	Solyc10g086350	E-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Spa_g19101	ATRABE1C,...	E-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	13	142

External Links

No external refs found!

Sacu_v1.1_s0031.g010582 (ATRABE1C, ATRAB8A,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation