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  5. Sacu_v1.1_s0030.g010395

Sacu_v1.1_s0030.g010395


Description : not classified & original description: CDS=1-855


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0030.g010395

Target Alias Description ECC score Gene Family Method Actions
Aev_g12594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35611 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Aspi01Gene39330.t1 Aspi01Gene39330 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46617.t2 RIN4, Aspi01Gene46617 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G072000.1 Ceric.18G072000 not classified & original description: pacid=50621871... 0.04 OrthoFinder output from all 47 species
Dde_g18230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23501 RIN4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15816 NOI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30195 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Len_g45937 RIN4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433308g0010 RIN4 RIN4 effector-triggered immunity RPM1-interacting factor 0.02 OrthoFinder output from all 47 species
Pir_g29217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33779 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Pnu_g05944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16131 No alias regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species
Spa_g09623 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Tin_g23904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003639_P001 RIN4, Zm00001e003639 RIN4 effector-triggered immunity RPM1-interacting factor 0.02 OrthoFinder output from all 47 species
Zm00001e036855_P001 Zm00001e036855 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 195 222
No external refs found!