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  5. Sacu_v1.1_s0030.g010316

Sacu_v1.1_s0030.g010316 (DME)


Aliases : DME

Description : methylcytosine-specific DNA glycosylase *(ROS1) & original description: CDS=1-3762


Gene families : OG0001282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001282_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0030.g010316
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Azfi_s1025.g095459 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.04 OrthoFinder output from all 47 species
Cba_g37940 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0090.g018728 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
Sam_g30228 No alias methylcytosine-specific DNA glycosylase *(ROS1) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!