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  5. Sacu_v1.1_s0030.g010278

Sacu_v1.1_s0030.g010278


Description : not classified & original description: CDS=116-3175


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0030.g010278

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00133150 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00089p00083270 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G46110 No alias Domain of unknown function (DUF966) 0.03 OrthoFinder output from all 47 species
AT5G10150 No alias Domain of unknown function (DUF966) 0.03 OrthoFinder output from all 47 species
AT5G59790 No alias Domain of unknown function (DUF966) 0.04 OrthoFinder output from all 47 species
Adi_g106265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18845.t1 Aspi01Gene18845 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34495.t1 Aspi01Gene34495 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53127.t1 Aspi01Gene53127 A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046319 No alias not classified & original description: CDS=53-2212 0.03 OrthoFinder output from all 47 species
Ceric.03G030000.1 Ceric.03G030000 not classified & original description: pacid=50571333... 0.05 OrthoFinder output from all 47 species
Ceric.10G058400.1 Ceric.10G058400 not classified & original description: pacid=50611779... 0.04 OrthoFinder output from all 47 species
Ceric.13G026100.1 Ceric.13G026100 not classified & original description: pacid=50635606... 0.04 OrthoFinder output from all 47 species
Ceric.23G080300.1 Ceric.23G080300 not classified & original description: pacid=50610288... 0.03 OrthoFinder output from all 47 species
Dac_g16699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016603001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g74370.1 LOC_Os01g74370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g39750.1 LOC_Os09g39750 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g10715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_40202g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g48516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g054800.3.1 Solyc04g054800 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g030470.4.1 Solyc06g030470 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc06g075690.3.1 Solyc06g075690 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g09824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003892_P002 Zm00001e003892 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e005317_P002 Zm00001e005317 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e027133_P001 Zm00001e027133 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e028781_P001 Zm00001e028781 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 85 234
No external refs found!