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  5. Sacu_v1.1_s0029.g010162

Sacu_v1.1_s0029.g010162 (ATROP4, ROP4, ATGP3, ARAC5)


Aliases : ATROP4, ROP4, ATGP3, ARAC5

Description : not classified & original description: CDS=1-690


Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0029.g010162
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00095870 ARAC7, ROP9,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
AT1G75840 ATROP4, ROP4,... RAC-like GTP binding protein 5 0.05 OrthoFinder output from all 47 species
AT2G17800 ATRAC1, ROP3,... Arabidopsis RAC-like 1 0.03 OrthoFinder output from all 47 species
AT4G35950 RAC2, ARAC6,... RAC-like 6 0.02 OrthoFinder output from all 47 species
AT5G45970 ARAC2, RAC2,... RAC-like 2 0.03 OrthoFinder output from all 47 species
Adi_g003765 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051539 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23892 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01235 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03825 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12798 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35809.t1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16703 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22077 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g03585 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04531 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05325 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18052 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018319001 ARAC9, ATROP8, ROP8 Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os06g12790.1 ATRAC8, ATROP10,... small GTPase (ROP) 0.04 OrthoFinder output from all 47 species
Lfl_g38022 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_948089g0010 ATRAC11, ARAC11,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
Msp_g38983 ATRAC11, ARAC11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01865 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05700 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01713 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04924 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11648 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14285 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51141 No alias small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01671 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10601 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03089 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03852 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013492_P001 ATRAC11, ARAC11,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
Zm00001e025245_P001 ATRAC11, ARAC11,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 79 150
No external refs found!