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  5. Sacu_v1.1_s0029.g010133

Sacu_v1.1_s0029.g010133 (ATH1, ATATH1, ABCA2)


Aliases : ATH1, ATATH1, ABCA2

Description : not classified & original description: CDS=111-2057


Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0029.g010133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00136690 ATH1, ATATH1,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT5G61690 ATH15, ATATH15 ABC2 homolog 15 0.04 OrthoFinder output from all 47 species
Aev_g01527 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07489 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36721.t1 ATH1, ATATH1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016230 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: CDS=354-3422 0.04 OrthoFinder output from all 47 species
Ceric.02G040100.1 ATH1, ATATH1,... subfamily ABCA transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cre14.g613950 ATH1, ATATH1, ABCA2 ABC transporter A family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g20236 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06226 ABCA1, AtABCA1 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g18500.1 ATH1, ATATH1, ABCA2 fatty acid transporter (ABCA). subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Msp_g36286 ATH15, ATATH15 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08946 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25161 No alias subfamily ABCA transporter & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g070960.3.1 ATH1, ATATH1,... fatty acid transporter (ABCA). subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Zm00001e004192_P001 ATH1, ATATH1,... fatty acid transporter (ABCA). subfamily ABCA transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 21 89
No external refs found!