Sacu_v1.1_s0029.g010130 (ATH7, ATATH7)

Aliases : ATH7, ATATH7

Description : subfamily ABCA transporter & original description: CDS=142-3033

Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0029.g010130

Target	Alias	Description	ECC score	Gene Family Method
AT3G47790	ATH7, ATATH7	ABC2 homolog 7	0.03	OrthoFinder output from all 47 species
Azfi_s0022.g016229	ATATH6, ATH6	subfamily ABCA transporter & original description: CDS=234-3275	0.03	OrthoFinder output from all 47 species
Cba_g14455	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000057.67	ATATH4, ABCA5, ATH4	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Cre14.g618400	ATH7, ATATH7	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Lfl_g05675	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g11278	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g16539	No alias	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Smo268954	ATATH6, ATH6	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005516	calmodulin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	662	806

External Links

No external refs found!