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  5. Sacu_v1.1_s0029.g010035

Sacu_v1.1_s0029.g010035


Description : not classified & original description: CDS=1-3003


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0029.g010035
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00127550 evm_27.TU.AmTr_v1... Protein QUIRKY OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G61300 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
AT4G00700 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
AT5G17980 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.02 OrthoFinder output from all 47 species
Adi_g115598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01059.t1 Aspi01Gene01059 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10498.t1 Aspi01Gene10498 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g49050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g40480.1 QKY, LOC_Os01g40480 Protein QUIRKY OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g44490.1 LOC_Os02g44490 no description available(sp|q9m2r0|ftip3_arath : 717.0) 0.03 OrthoFinder output from all 47 species
MA_10427533g0010 QKY Protein QUIRKY OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10436836g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 197.0) 0.03 OrthoFinder output from all 47 species
MA_3135258g0010 QKY no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g00440.1 No alias no description available(sp|q60ew9|ftip7_orysj : 926.0) 0.02 OrthoFinder output from all 47 species
Msp_g13144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g58936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004492 No alias not classified & original description: CDS=1-2934 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0211.g025914 No alias not classified & original description: CDS=1-2928 0.04 OrthoFinder output from all 47 species
Solyc01g006620.3.1 Solyc01g006620 no description available(sp|q9m2r0|ftip3_arath : 1132.0) 0.04 OrthoFinder output from all 47 species
Solyc03g113190.1.1 QKY, Solyc03g113190 Protein QUIRKY OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g02263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g03078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54189 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016221_P001 Zm00001e016221 no description available(sp|q9m2r0|ftip3_arath : 957.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 581 700
IPR000008 C2_dom 251 353
IPR000008 C2_dom 418 527
IPR000008 C2_dom 13 102
IPR013583 PRibTrfase_C 845 1000
No external refs found!