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  5. Sacu_v1.1_s0028.g009985

Sacu_v1.1_s0028.g009985


Description : not classified & original description: CDS=162-1658


Gene families : OG0003024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0028.g009985

Target Alias Description ECC score Gene Family Method Actions
AT4G25070 No alias unknown protein; EXPRESSED IN: cultured cell; BEST... 0.03 OrthoFinder output from all 47 species
Aev_g47818 No alias component *(SCD2)of post-Golgi trafficking SCD complex &... 0.02 OrthoFinder output from all 47 species
Aob_g05994 No alias component *(SCD2)of post-Golgi trafficking SCD complex &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene46404.t1 Aspi01Gene46404 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008631001 No alias Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.02 OrthoFinder output from all 47 species
LOC_Os11g31950.1 LOC_Os11g31950 SCD2 component of post-Golgi trafficking SCD complex 0.05 OrthoFinder output from all 47 species
Ore_g34075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g118390.3.1 Solyc03g118390 SCD2 component of post-Golgi trafficking SCD complex 0.05 OrthoFinder output from all 47 species
Zm00001e018754_P001 Zm00001e018754 SCD2 component of post-Golgi trafficking SCD complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!