Aliases : LBD4
Description : AS2/LOB-type transcription factor & original description: CDS=173-700
Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00041p00044170 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.01 | OrthoFinder output from all 47 species | |
Ehy_g13259 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g24755 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g01961 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g17986 | LOB | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g02552 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g04983 | LOB | AS2/LOB-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e031510_P001 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003747 | translation release factor activity | IEP | HCCA |
MF | GO:0004146 | dihydrofolate reductase activity | IEP | HCCA |
BP | GO:0006415 | translational termination | IEP | HCCA |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | HCCA |
BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | HCCA |
MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | HCCA |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | HCCA |
BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | HCCA |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | HCCA |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | HCCA |
BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | HCCA |
MF | GO:0050661 | NADP binding | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004883 | LOB | 34 | 131 |
No external refs found! |