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  5. Sacu_v1.1_s0028.g009927

Sacu_v1.1_s0028.g009927


Description : not classified & original description: CDS=200-1417


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0028.g009927

Target Alias Description ECC score Gene Family Method Actions
Adi_g007980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13533.t1 Aspi01Gene13533 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60804.t1 Aspi01Gene60804 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67042.t1 Aspi01Gene67042 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0092.g043090 No alias not classified & original description: CDS=327-2291 0.04 OrthoFinder output from all 47 species
Cba_g26521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G050900.1 Ceric.38G050900 not classified & original description: pacid=50580012... 0.02 OrthoFinder output from all 47 species
Dcu_g04519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g29710.1 LOC_Os11g29710 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g21990.1 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g02374 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33138 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30854 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e014568_P002 Zm00001e014568 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004061 arylformamidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019441 tryptophan catabolic process to kynurenine IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0070189 kynurenine metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 355 395
IPR001810 F-box_dom 47 85
No external refs found!