Sacu_v1.1_s0027.g009688 (LOS1)

Aliases : LOS1

Description : mRNA-translocation factor *(eEF2)) & original description: CDS=16-2658

Gene families : OG0001393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001393_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0027.g009688

Target	Alias	Description	ECC score	Gene Family Method
Aev_g06118	LOS1	mRNA-translocation factor *(eEF2)) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g23642	LOS1	mRNA-translocation factor *(eEF2)) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g08640	LOS1	mRNA-translocation factor *(eEF2)) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3s128_50V3.1	LOS1, Pp3s128_50	Ribosomal protein S5/Elongation factor G/III/V family protein	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005517	Transl_elong_EFG/EF2_IV	653	764
IPR000795	T_Tr_GTP-bd_dom	59	384
IPR000640	EFG_V-like	766	851
IPR004161	EFTu-like_2	436	509
IPR041095	EFG_II	529	591

External Links

No external refs found!