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  5. Sacu_v1.1_s0026.g009582

Sacu_v1.1_s0026.g009582


Description : not classified & original description: CDS=1401-2480


Gene families : OG0001005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0026.g009582

Target Alias Description ECC score Gene Family Method Actions
Als_g05343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77204 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g77522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16748 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g47387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!