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  5. Sacu_v1.1_s0026.g009506

Sacu_v1.1_s0026.g009506 (AtMYB50, MYB50)


Aliases : AtMYB50, MYB50

Description : not classified & original description: CDS=317-1252


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0026.g009506
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00224180 MYB3, ATMYB3,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT2G32460 ATMYB101, MYB101, ATM1 myb domain protein 101 0.02 OrthoFinder output from all 47 species
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.02 OrthoFinder output from all 47 species
Adi_g069198 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Adi_g104203 AtMYB107, MYB107 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07342 AtMYB17, MYB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19913 MYB86, ATMYB86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G002200.1 AtMYB50, MYB50,... not classified & original description: pacid=50593537... 0.03 OrthoFinder output from all 47 species
Ceric.32G055600.1 AtMYB20, MYB20,... not classified & original description: pacid=50598352... 0.03 OrthoFinder output from all 47 species
Dac_g14180 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dde_g47604 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04306 AtMYB50, MYB50 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g26090 MYB121, ATMYB121 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024036001 MYB32, AtMYB32 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Gb_26833 ATMYB61, MYB61 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_29520 MYB86, ATMYB86 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Lfl_g13620 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Lfl_g17349 ATMYB4, MYB4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_23242g0010 MYB3, ATMYB3 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Pnu_g17375 MYB55, AtMYB55 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04526 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08138 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22008 MYB86, ATMYB86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26286 AtMYB20, MYB20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034807_P001 AtMYB42, MYB42,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e042415_P001 MYB60, AtMYB60,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 58 99
IPR001005 SANT/Myb 3 50
No external refs found!