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  5. Sacu_v1.1_s0026.g009479

Sacu_v1.1_s0026.g009479


Description : not classified & original description: CDS=125-1765


Gene families : OG0002723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0026.g009479
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Adi_g007225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g014741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0074.g037460 No alias not classified & original description: CDS=237-1853 0.03 OrthoFinder output from all 47 species
Dcu_g05578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_105966g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g31880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!