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  5. Sacu_v1.1_s0025.g009220

Sacu_v1.1_s0025.g009220


Description : not classified & original description: CDS=276-1655


Gene families : OG0001257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0025.g009220
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Aev_g13206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g39462.2 LOC_Os09g39462 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_13996g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g10349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22994 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009475_P001 Zm00001e009475 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e033627_P001 Zm00001e033627 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR001374 R3H_dom 98 149
IPR024771 SUZ 189 242
No external refs found!