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  5. Sacu_v1.1_s0024.g009188

Sacu_v1.1_s0024.g009188 (RHF2A)


Aliases : RHF2A

Description : regulatory E3 ubiquitin ligase *(RHF) & original description: CDS=1-1047


Gene families : OG0001882 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001882_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0024.g009188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00158820 RHF2A,... E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g060868 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Als_g32008 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g12346 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.04 OrthoFinder output from all 47 species
Pp3c13_14240V3.1 RHF2A, Pp3c13_14240 RING-H2 group F2A 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 22 92
No external refs found!