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Aliases : PAM68
Description : protein involved in PS-II assembly *(PAM68) & original description: CDS=1-531
Gene families : OG0005725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005725_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00088520 | evm_27.TU.AmTr_v1... | Photosynthesis.photophosphorylation.photosystem... | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g112212 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g26970 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g16015 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene55602.t1 | PAM68, Aspi01Gene55602 | protein involved in PS-II assembly *(PAM68) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g28925 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01028843001 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g21530.1 | PAM68, LOC_Os06g21530 | PAM68 protein involved in PS-II assembly | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g38910.1 | LOC_Os10g38910 | PAM68 protein involved in PS-II assembly | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g02243 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19463 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ppi_g00344 | PAM68 | protein involved in PS-II assembly *(PAM68) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g007860.1.1 | Solyc03g007860 | PAM68 protein involved in PS-II assembly | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021855 | PAM68-like | 52 | 174 |
| No external refs found! |