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  5. Sacu_v1.1_s0023.g008917

Sacu_v1.1_s0023.g008917 (TEL1)


Aliases : TEL1

Description : not classified & original description: CDS=1-2472


Gene families : OG0003402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0023.g008917
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT1G67770 TEL2 terminal EAR1-like 2 0.04 OrthoFinder output from all 47 species
Aspi01Gene54244.t1 TEL1, Aspi01Gene54244 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042632 TEL1 not classified & original description: CDS=1-3177 0.05 OrthoFinder output from all 47 species
Ceric.02G098500.1 TEL1, Ceric.02G098500 not classified & original description: pacid=50585133... 0.03 OrthoFinder output from all 47 species
Ceric.39G026900.1 TEL1, Ceric.39G026900 not classified & original description: pacid=50582960... 0.06 OrthoFinder output from all 47 species
Dac_g14075 TEL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g44977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003988001 TEL1 Protein terminal ear1 OS=Zea mays 0.05 OrthoFinder output from all 47 species
Gb_20291 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Gb_21853 TEL1 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 205.0) 0.05 OrthoFinder output from all 47 species
LOC_Os01g68000.1 TEL1, LOC_Os01g68000 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_68449g0010 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Mp1g04100.1 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Sam_g09570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g013930.2.1 TEL1, Solyc05g013930 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 355.0) 0.04 OrthoFinder output from all 47 species
Solyc05g056360.2.1 MCT1, Solyc05g056360 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Tin_g44662 TEL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003779 actin binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 568 680
No external refs found!