1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0023.g008868

Sacu_v1.1_s0023.g008868


Description : not classified & original description: CDS=1-990


Gene families : OG0000962 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000962_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0023.g008868
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G62981 No alias Protein of unknown function (DUF1191) 0.03 OrthoFinder output from all 47 species
Adi_g077851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G084200.1 Ceric.09G084200 not classified & original description: pacid=50586651... 0.03 OrthoFinder output from all 47 species
Dcu_g05654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_8243926g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g16826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006393 No alias not classified & original description: CDS=1-1038 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g020005 No alias not classified & original description: CDS=1-1089 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020526 No alias not classified & original description: CDS=1-1455 0.04 OrthoFinder output from all 47 species
Solyc04g055100.1.1 Solyc04g055100 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc08g080070.1.1 Solyc08g080070 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g51652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039266_P001 Zm00001e039266 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR010605 DUF1191 50 235
No external refs found!