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  5. Sacu_v1.1_s0023.g008846

Sacu_v1.1_s0023.g008846


Description : not classified & original description: CDS=1-1377


Gene families : OG0007930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0023.g008846
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00103210 evm_27.TU.AmTr_v1... Adenine DNA glycosylase OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Cre02.g082000 No alias Adenine DNA glycosylase OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os12g10850.1 LOC_Os12g10850 Adenine DNA glycosylase OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc09g018850.3.1 Solyc09g018850 Adenine DNA glycosylase OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006284 base-excision repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000445 HhH_motif 163 186
IPR029119 MutY_C 319 446
IPR003265 HhH-GPD_domain 94 225
No external refs found!