- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PIFI
Description : not classified & original description: CDS=204-1073
Gene families : OG0008080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0022.g008701 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00104p00098970 | PIFI,... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT3G15840 | PIFI | post-illumination chlorophyll fluorescence increase | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g01632 | PIFI | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.02G104100.1 | PIFI, Ceric.02G104100 | not classified & original description: pacid=50584792... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g08630 | PIFI | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g02647 | PIFI | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01017340001 | PIFI | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04157 | PIFI | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05205 | PIFI | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g23110.1 | PIFI | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g15669 | PIFI | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g08562 | PIFI | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g13671 | PIFI | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g16426 | PIFI | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo127024 | PIFI | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07177 | PIFI | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003852 | 2-isopropylmalate synthase activity | IEP | HCCA |
| BP | GO:0006551 | leucine metabolic process | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | HCCA |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009098 | leucine biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
| BP | GO:0017004 | cytochrome complex assembly | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| MF | GO:0042586 | peptide deformylase activity | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043022 | ribosome binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |