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  5. Sacu_v1.1_s0022.g008630

Sacu_v1.1_s0022.g008630


Description : not classified & original description: CDS=90-875


Gene families : OG0006237 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0022.g008630
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Adi_g075640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008253 5'-nucleotidase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
InterPro domains Description Start Stop
IPR013078 His_Pase_superF_clade-1 73 140
No external refs found!