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  5. Sacu_v1.1_s0021.g008329

Sacu_v1.1_s0021.g008329


Description : not classified & original description: CDS=1-1188


Gene families : OG0001686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001686_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0021.g008329
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Aop_g21409 emb1417 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 203 232
IPR002885 Pentatricopeptide_repeat 167 190
No external refs found!