Sacu_v1.1_s0020.g008189 (ATNFXL1, NFXL1)

Aliases : ATNFXL1, NFXL1

Description : transcriptional repressor *(NF-X1) & original description: CDS=1-3990

Gene families : OG0006722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006722_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0020.g008189

Target	Alias	Description	ECC score	Gene Family Method
Ala_g12991	ATNFXL1, NFXL1	transcriptional repressor *(NF-X1) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g77936	ATNFXL1, NFXL1	transcriptional repressor *(NF-X1) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g10965	ATNFXL1, NFXL1	transcriptional repressor *(NF-X1) & original description: none	0.03	OrthoFinder output from all 47 species
Smo30433	ATNFXL1, NFXL1	NF-X1-type zinc finger protein NFXL1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Zm00001e036022_P001	ATNFXL1, NFXL1,...	transcriptional repressor (NF-X1)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004540	ribonuclease activity	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000967	Znf_NFX1	776	793
IPR000967	Znf_NFX1	666	683
IPR000967	Znf_NFX1	886	901
IPR000967	Znf_NFX1	484	500
IPR000967	Znf_NFX1	737	748
IPR000967	Znf_NFX1	602	619
IPR000967	Znf_NFX1	538	556
IPR000967	Znf_NFX1	833	849

External Links

No external refs found!