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  5. Sacu_v1.1_s0020.g008125

Sacu_v1.1_s0020.g008125


Description : not classified & original description: CDS=1-2199


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0020.g008125
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Adi_g060828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22608.t1 Aspi01Gene22608 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22609.t1 Aspi01Gene22609 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22616.t1 Aspi01Gene22616 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010808001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_26934 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g58500.1 LOC_Os01g58500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g49000.1 LOC_Os06g49000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g08290.1 LOC_Os07g08290 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g12779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g094650.3.1 Solyc12g094650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040439_P001 Zm00001e040439 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR025315 DUF4220 51 449
IPR007658 DUF594 666 717
No external refs found!