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  5. Sacu_v1.1_s0020.g008010

Sacu_v1.1_s0020.g008010


Description : not classified & original description: CDS=1-366


Gene families : OG0000937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000937_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0020.g008010
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Aev_g21406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07034 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g01996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47055 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g47224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g18360.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g15321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17421 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g41732 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g16334 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g34271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo405421 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g26803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55806 LNG1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10611 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g12819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR025486 DUF4378 42 116
No external refs found!