Aliases : ARF19, IAA22, ARF11
Description : ARF-type transcription factor & original description: CDS=1-3501
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00017p00182820 | ARF16,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00036p00215020 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00044p00116500 | ARF1,... | Auxin response factor 7 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00211p00025860 | MP, IAA24, ARF5,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AT5G20730 | TIR5, MSG1,... | Transcriptional factor B3 family protein /... | 0.03 | OrthoFinder output from all 47 species | |
AT5G60450 | ARF4 | auxin response factor 4 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g011925 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g054964 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g08441 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g32218 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g33345 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g12700 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g12905 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g59651 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene11714.t1 | ARF6, Aspi01Gene11714 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene55123.t1 | ARF6, Aspi01Gene55123 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene61150.t1 | ARF16, Aspi01Gene61150 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0005.g009155 | ARF6 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0038.g026103 | ARF6 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0065.g035934 | No alias | not classified & original description: CDS=1-342 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g33073 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.18G060100.1 | ARF1, Ceric.18G060100 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.30G022300.1 | ARF6, Ceric.30G022300 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.30G068500.1 | ARF16, Ceric.30G068500 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g07132 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g08681 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g09257 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g12286 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g18587 | ARF16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g20778 | ARF14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025159001 | ARF4 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01032251001 | ARF19, IAA22, ARF11 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01035204001 | ARF8, ATARF8 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01037136001 | ARF1 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
Gb_32864 | ARF6 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Gb_39686 | ARF6 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g36054.1 | ARF1, LOC_Os04g36054 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g56850.1 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g57610.1 | ARF8, ATARF8,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g46410.1 | ARF6, LOC_Os06g46410 | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os11g32110.1 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Len_g28161 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g07818 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g40471 | ARF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_85955g0010 | ARF19, IAA22, ARF11 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Mp1g07070.1 | ARF10 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Mp1g12750.1 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g15857 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g26452 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g50454 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g06380 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g19455 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g25925 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0032.g010740 | TIR5, MSG1,... | ARF-type transcription factor & original description: CDS=1-2400 | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29254 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g47786 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e004554_P002 | ARF16, Zm00001e004554 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e012670_P001 | ARF16, Zm00001e012670 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e015164_P002 | ARF10, Zm00001e015164 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e030290_P005 | ARF16, Zm00001e030290 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e041910_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No external refs found! |