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  5. Sacu_v1.1_s0019.g007893

Sacu_v1.1_s0019.g007893


Description : protein involved in PS-II assembly *(Psb33) & original description: CDS=1-930


Gene families : OG0003633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0019.g007893
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00029990 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
AT1G71500 No alias Rieske (2Fe-2S) domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g025805 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Ala_g01051 No alias protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Ala_g12430 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Als_g11770 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Aob_g00988 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Aop_g06553 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene15023.t1 Aspi01Gene15023 protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0212.g058145 No alias protein involved in PS-II assembly *(Psb33) & original... 0.06 OrthoFinder output from all 47 species
Cba_g14675 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Cba_g66964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G079700.1 Ceric.16G079700 protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Ceric.32G073500.1 Ceric.32G073500 protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Dac_g07653 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g20317 No alias protein involved in PS-II assembly *(Psb33) & original... 0.07 OrthoFinder output from all 47 species
Dde_g09027 No alias protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g15961 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01036428001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Gb_17341 No alias Psb33 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Len_g01078 No alias protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g02682 No alias protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g19856 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Msp_g04633 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g07139 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Ore_g30344 No alias protein involved in PS-II assembly *(Psb33) & original... 0.02 OrthoFinder output from all 47 species
Pir_g11115 No alias protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g30084 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Sam_g08540 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Solyc11g042640.2.1 Solyc11g042640 Psb33 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Spa_g09786 No alias protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Tin_g01591 No alias protein involved in PS-II assembly *(Psb33) & original... 0.06 OrthoFinder output from all 47 species
Tin_g20886 No alias protein involved in PS-II assembly *(Psb33) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012748 Rieske-like_NirD 99 211
No external refs found!