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  5. Sacu_v1.1_s0019.g007779

Sacu_v1.1_s0019.g007779


Description : DNA primase and helicase *(TWINKLE) & original description: CDS=201-2615


Gene families : OG0002154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002154_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0019.g007779

Target Alias Description ECC score Gene Family Method Actions
Adi_g109465 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14570 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11664 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021728001 No alias Cell cycle.organelle machineries.DNA replication.DNA... 0.04 OrthoFinder output from all 47 species
Pir_g11362 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57752 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013523 No alias DNA primase and helicase *(TWINKLE) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004592 pantoate-beta-alanine ligase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006171 TOPRIM_domain 295 383
No external refs found!